Tools used

uBin:

https://github.com/ProbstLab/uBin

Abawaca:

https://github.com/CK7/abawaca

Maxbin2: https://academic.oup.com/bioinformatics/article/32/4/605/1744462

ESOM-wrapper:

https://github.com/tetramerFreqs/Binning

iTOL:

https://itol.embl.de/

Phylophlan2:

https://huttenhower.sph.harvard.edu/phylophlan/

GTDB-tk: https://github.com/Ecogenomics/GTDBTk

Microbeannotator: https://github.com/cruizperez/MicrobeAnnotator

R Pacakages:

• GGplot
• OpenStreetViewMap
• tidyverse